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Accession: PRJNA465812 ID: 465812

Genome-Wide Analysis of Transcriptional Changes and Genes that Contribute to Fitness during Degradation of the Anthropogenic Pollutant Pentachlorophenol by Sphingobium chlorophenolicum

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA465812; GEO: GSE114149
TypeUmbrella project
PublicationsFlood JJ et al., "Genome-Wide Analysis of Transcriptional Changes and Genes That Contribute to Fitness during Degradation of the Anthropogenic Pollutant Pentachlorophenol by Sphingobium chlorophenolicum.", mSystems, 2018 Nov-Dec;3(6)
SubmissionRegistration date: 8-May-2018
Copley, Molecular, Cellular and Developmental Biology, University of Colorado Boulder
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments39
Publications
PubMed1
PMC1
Other datasets
BioSample39
GEO DataSets3
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes35
SRA Data Details
ParameterValue
Data volume, Gbases16
Data volume, Mbytes5225
Genome-Wide Analysis of Transcriptional Changes and Genes that Contribute to Fitness during Degradation of the Anthropogenic Pollutant Pentachlorophenol by Sphingobium chlorophenolicum encompasses the following 2 sub-projects:
Project TypeNumber of Projects
Other1
BioProject
accession
OrganismTitle
PRJNA470607Sphingobium chlorophenolicum L-1Sphingobium chlorophenolicum Confronts the Stresses Associated with Pentachlorophenol and Four Toxic Downstream Metabolites to Utilize a Suboptimal Nutrient Source [Tn-Seq] (Copley, Molecular, Cellular...)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA464372Sphingobium chlorophenolicum L-1Sphingobium chlorophenolicum Confronts the Stresses Associated with Pentachlorophenol and Four Toxic Downstream Metabolites to Utilize a Suboptimal Nutrient Source [RNA-seq] (Copley, Molecular, Cellular...)

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