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Expanding on the 16S rRNA data obtained in another component of the Human Microbiome Project (HMP), whole genome shotgun (WGS) sequencing will be performed on samples taken from the digestive tract, mouth, skin, nose, and female urogenital tract of human subjects to gain insight into the genes and pathways present in the human microbiome.
| Accession | PRJNA43017 |
| Type | Umbrella project (Subtype:Funding initiative) |
| Submission | Registration date: 4-Jan-2010
NIH Human Microbiome Consortium |
| NCBI Links | |
| Related Resources | |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (Genomic DNA) | 17503 |
| SRA Experiments | 3528 |
| Protein Sequences | 854968 |
| Publications |
| PubMed | 2 |
| PMC | 2 |
| Other datasets |
| BioSample | 56296 |
| Genotype and Phenotype (dbGaP) | 1 |
Human Microbiome Project (HMP) Metagenome Projects encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
| Phenotype or Genotype | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA48475 | human metagenome | Human Microbiome Project (HMP) Metagenomic WGS Projects, deeper sequencing of the human microbiome samples: Mock Pilot (NIH Human Microbiome Consortium) | | PRJNA48477 | human metagenome | Human Microbiome Project (HMP) Metagenomic WGS Projects, deeper sequencing of the human microbiome samples: Clinical Pilot (NIH Human Microbiome Consortium) | | PRJNA48479 | human metagenome | Human Microbiome Project (HMP) Metagenomic WGS Projects, deeper sequencing of the human microbiome samples: Production Phase (NIH Human Microbiome Consortium) |
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