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Accession: PRJNA40699 ID: 40699

Escherichia coli MS 85-1

Demonstration Project Reference Genome for Human Microbiome Project

See Genome Information for Escherichia coli
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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
This project is a component of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP)
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7503 additional projects are related by organism.
2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).
28 additional projects are components of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP).

This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

AccessionPRJNA40699
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismEscherichia coli MS 85-1[Taxonomy ID: 679202]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli MS 85-1
SubmissionRegistration date: 30-Jun-2010
WUGSC
Locus Tag PrefixHMPREF9350
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)235
WGS master1
SRA Experiments3
Protein Sequences5994
Other datasets
BioSample1
Assembly1
Assembly details:
SRA Data Details
ParameterValue
Data volume, Mbases77
Data volume, Mbytes165

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