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Genome Information for Thermoplasmatales archaeon I-plasma
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5 additional projects are components of the Combined UBA and UBA BS acid mine drainage biofilm metagenome.
DNA was extracted from 2 separate biofilms (UBA and UBA BS) that were collected underground at the Ultraback A location (UBA site) in the Richmond Mine, Iron Mountain, CA.
More...DNA was extracted from 2 separate biofilms (UBA and UBA BS) that were collected underground at the Ultraback A location (UBA site) in the Richmond Mine, Iron Mountain, CA. Iron Mountain is located at 40 deg 40' 38.42'' N and 122 deg 31' 19.90'' W (elevation ~ 3,100 ft). The UBA sample (collected June 2005) was a pink subaerial biofilm whereas the UBA BS sample (collected November 2005) was a thick floating biofilm that was subdivided into strips.
The WGS projects can be found using the Project data link. Less...
| Accession | PRJNA40093 |
| Data Type | Genome sequencing and assembly |
| Scope | Environment |
| Organism | Thermoplasmatales archaeon I-plasma[Taxonomy ID: 667138] Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Thermoplasmatales; Thermoplasmatales archaeon I-plasma |
| Publications | Dick GJ et al., "Community-wide analysis of microbial genome sequence signatures.", Genome Biol, 2009;10(8):R85 |
| Submission | Registration date: 26-Aug-2009
University of California Berkeley |
| Locus Tag Prefix | GEV52 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 13 |
| WGS master | 1 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related Project Category: Same Sample
PRJNA29437 : Combined UBA and UBA BS acid mine drainage biofilm metagenome