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Accession: PRJNA40077 ID: 40077

Cereibacter sphaeroides 2.4.1

Genome sequencing with short reads

See Genome Information for Cereibacter sphaeroides
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121 additional projects are related by organism.
To test methods for assembly of very short reads, five microbial genomes were selected which have a finished reference sequence available. More...
AccessionPRJNA40077
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismCereibacter sphaeroides 2.4.1[Taxonomy ID: 272943]
Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Cereibacter; Cereibacter sphaeroides; Cereibacter sphaeroides 2.4.1
Publications
  • Ribeiro FJ et al., "Finished bacterial genomes from shotgun sequence data.", Genome Res, 2012 Nov;22(11):2270-7
  • Maccallum I et al., "ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads.", Genome Biol, 2009;10(10):R103
SubmissionRegistration date: 25-Jun-2012
Broad Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)20
WGS master2
SRA Experiments153
Publications
PubMed2
PMC2
Other datasets
BioSample15
Assembly2
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases97
Data volume, Tbytes0.42

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