Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA40075 ID: 40075

Escherichia coli str. K-12 substr. MG1655

Genome sequencing with short reads

See Genome Information for Escherichia coli
Navigate Across
7503 additional projects are related by organism.
To test methods for assembly of very short reads, five microbial genomes were selected which have a finished reference sequence available. More...
AccessionPRJNA40075
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEscherichia coli str. K-12 substr. MG1655[Taxonomy ID: 511145]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli str. K-12 substr. MG1655
Publications
  • Ribeiro FJ et al., "Finished bacterial genomes from shotgun sequence data.", Genome Res, 2012 Nov;22(11):2270-7
  • Maccallum I et al., "ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads.", Genome Biol, 2009;10(10):R103
SubmissionRegistration date: 25-Jun-2012
Broad Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4
WGS master2
SRA Experiments216
Publications
PubMed2
PMC2
Other datasets
BioSample17
Assembly2
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases111
Data volume, Tbytes0.18

Supplemental Content

Related information

LinkOut to external resources

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI
Support Center