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Accession: PRJNA39411 ID: 39411

Porphyromonas sp. 31_2 strain:31_2

Reference genome for the Human Microbiome Project

See Genome Information for Porphyromonas
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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
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2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).
15 additional projects are related by organism.

Porphyromonas sp. 31_2 . This strain was isolated from a human fecal sample. This strain will be used for comparative genome analysis.

AccessionPRJNA39411
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismPorphyromonas sp. 31_2[Taxonomy ID: 658663]
Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; unclassified Porphyromonas; Porphyromonas sp. 31_2
SubmissionRegistration date: 25-Jun-2014
Broad Institute
Locus Tag PrefixHMPREF1002
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)20
WGS master1
SRA Experiments4
Protein Sequences4498
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000712235.1ScaffoldACUD00000000SAMN00103275
Porphyromonas sp. 31_2
SRA Data Details
ParameterValue
Data volume, Mbases108
Data volume, Mbytes250

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