See
Genome Information for Puccinia graminis
The
CSIRO Plant Industry, Australia in collaboration with
MIT through The Broad Institute is sequencing genomes of four Australian races
Puccinia graminis tritici, the stem rust fungi pathogen of wheat.
CSIRO is carrying out research to identify avirulence/effector proteins of P. graminis tritici. For this, CSIRO will use deep sequencing technologies to identify polymorphic fungi genes expressed during infection and encoding secreted proteins.
MIT will also use these technologies to test the feasibility of characterizing the secretome of the parasitic fungus by direct sequencing cDNA copies of genes expressed in haustoria of P. graminis tritici. MIT through The Broad Institute has expertise and technology for analysing fungal genome sequences and has produced the first complete genome sequence of P. More...
The
CSIRO Plant Industry, Australia in collaboration with
MIT through The Broad Institute is sequencing genomes of four Australian races
Puccinia graminis tritici, the stem rust fungi pathogen of wheat.
CSIRO is carrying out research to identify avirulence/effector proteins of P. graminis tritici. For this, CSIRO will use deep sequencing technologies to identify polymorphic fungi genes expressed during infection and encoding secreted proteins.
MIT will also use these technologies to test the feasibility of characterizing the secretome of the parasitic fungus by direct sequencing cDNA copies of genes expressed in haustoria of P. graminis tritici. MIT through The Broad Institute has expertise and technology for analysing fungal genome sequences and has produced the first complete genome sequence of P. graminis tritici.
Both CSIRO and MIT are collaborating to produce the genomic sequence for four Australian races of P. graminis tritici to determine levels of polymorphisms, particularly in genes expressed during infection and encoding secreted proteins.
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| Accession | PRJNA39225 |
| Type | Umbrella Comparative genomics project (Subtype:Comparative genomics) |
| Organism | Puccinia graminis f. sp. tritici[Taxonomy ID: 56615] Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; Puccinia graminis f. sp. tritici |
| Submission | Registration date: 6-Jul-2009
Broad Institute |
| Related Resources | |
Project Data:
No public data is linked to this project. Any recently released data that cites this project will be linked to it within a few days.
Puccinia graminis f. sp. tritici encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : No data links |
4
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