See
Genome Information for Hamiltosporidium tvaerminnensis
The
University of British Columbia, in collaboration with the
Fasteris S.A. and
University of Basel, is sequencing the
Hamiltosporidium tvaerminnensis (misnomer:
Octosporea bayeri) strain OER-3-3 genome at 34.2-37.2x coverage using whole genome shotgun (WGS) sequencing.
Genomic DNA was obtained from purified spores isolated from a laboratory culture of infected Daphnia magna host.
| Accession | PRJNA39213 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Hamiltosporidium tvaerminnensis OER-3-3[Taxonomy ID: 657448] Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Dubosqiidae; Hamiltosporidium; Hamiltosporidium tvaerminnensis; Hamiltosporidium tvaerminnensis OER-3-3 |
| Publications | Corradi N et al., "Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions.", Genome Biol, 2009;10(10):R106 |
| Submission | Registration date: 30-Sep-2009
|
| Locus Tag Prefix | OBA |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (WGS master) | 1 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |