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Accession: PRJNA389992 ID: 389992

Homo sapiens (human)

Small RNA (sRNA) RNA-seq analysis of BORIS/CTCFL knockdown in K562 cell line

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This project is a component of the RNA-seq and small RNA-seq analysis of BORIS/CTCFL knockdown in K562 cell line
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1 additional project is a component of the RNA-seq and small RNA-seq analysis of BORIS/CTCFL knockdown in K562 cell line.
66644 additional projects are related by organism.
The study involved transcriptome analysis using RNA-seq knockdown of BORIS/CTCFL gene expression in K652 cancer cell line using inducible shRNA. More...
AccessionPRJNA389992; GEO: GSE99899
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsTeplyakov E et al., "The downregulation of putative anticancer target BORIS/CTCFL in an addicted myeloid cancer cell line modulates the expression of multiple protein coding and ncRNA genes.", Oncotarget, 2017 Sep 26;8(43):73448-73468
SubmissionRegistration date: 11-Jun-2017
Molecular Epigenetics, GIBH
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases4
Data volume, Mbytes1677

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