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Accession: PRJNA388667 ID: 388667

Homo sapiens (human)

Characterization of transcripts bound by LARP1 in the free 40S fraction isolated by sucrose gradients

See Genome Information for Homo sapiens
RNA binding protein LARP1 binds preferentially to mRNAs containing a 5' Tract of Oligo Pyrimidines (5'-TOP) motif Overall design: RIP-seq performed with anti-LARP1 antibody or Normal Rabbit Serum control IgG from the free 40S fraction isolated from HCT116 cells, background measured with IgG RIP-seq and compared to Input RNA
AccessionPRJNA388667; GEO: GSE99502
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
SubmissionRegistration date: 31-May-2017
Laboratory of Metabolism and Cancer, IDIBELL
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases13
Data volume, Mbytes8395

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