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Genome Information for Candidatus Parvarchaeum acidiphilum
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Small size selected cells (<450 nm) by filtration of acid mine drainage from the UBA site at Richmond Mine at Iron Mountain, California.
This library was constructed by filtering the Ultraback A (UBA) drift Iron Mountain biofilm through a 450 nm filter to enrich for ultra-small archaea, called ARMAN. More...
Small size selected cells (<450 nm) by filtration of acid mine drainage from the UBA site at Richmond Mine at Iron Mountain, California.
This library was constructed by filtering the Ultraback A (UBA) drift Iron Mountain biofilm through a 450 nm filter to enrich for ultra-small archaea, called ARMAN. The UBA sample was a pink subaerial biofilm collected June 2005.
60 Mbs of that filtrate was then Sanger sequenced and a near complete genome of one of the ARMAN groups was obtained with coverage up to 15X. The genome has been named Candidatus Parvarchaeum acidiphilum (ARMAN-4). Less...
| Accession | PRJNA38567 |
| Data Type | Genome sequencing and assembly |
| Scope | Environment |
| Organism | Candidatus Parvarchaeum acidiphilum ARMAN-4[Taxonomy ID: 662760] Archaea; Candidatus Parvarchaeota; Candidatus Parvarchaeum; Candidatus Parvarchaeum acidiphilum; Candidatus Parvarchaeum acidiphilum ARMAN-4 |
| Publications | Baker BJ et al., "Enigmatic, ultrasmall, uncultivated Archaea.", Proc Natl Acad Sci U S A, 2010 May 11;107(19):8806-11 |
| Submission | Registration date: 23-Nov-2009
Univ. of California Berkeley |
| Locus Tag Prefix | BJBARM4 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide | 44 |
| Protein Sequences | 911 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |
Related Project Category: Same Sample
PRJNA36661 : Filtrate from UBA acid mine drainage sample