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Small size selected cells (<450 nm) by filtration of Acid mine drainage from the UBA site at Richmond Mine at Iron Mountain, California.
This library was constructed by filtering the Ultraback A drift Iron Mountain biofilm through a 450 nm filter to enrich for ultra-small Archaea, called ARMAN. 60 Mbs of that filtrate was then Sanger sequenced and near complete genomes of two of the ARMAN groups were obtained with coverage up to 15X. The two genomes have been named Candidatus Parvarchaeum acidiphilum (ARMAN-4) and Candidatus Parvarchaeum acidophilus (ARMAN-5).
| Accession | PRJNA36661 |
| Data Type | Genome sequencing |
| Scope | Environment |
| Organism | mine drainage metagenome[Taxonomy ID: 410659] unclassified sequences; metagenomes; ecological metagenomes; mine drainage metagenome |
| Publications | Baker BJ et al., "Enigmatic, ultrasmall, uncultivated Archaea.", Proc Natl Acad Sci U S A, 2010 May 11;107(19):8806-11 |
| Submission | Registration date: 10-Apr-2009
|
| Locus Tag Prefix | BJB |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 119 |
| WGS master | 2 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
Related Project Category: Same Sample
PRJNA38567 : Near complete genome from Candidatus Parvarchaeum acidiphilum ARMAN-4
PRJNA38569 : Near complete genome from Candidatus Parvarchaeum acidiphilus ARMAN-5