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Accession: PRJNA345597 ID: 345597

Lates calcarifer isolate:ASB-BC8 (barramundi perch)

Lates calcarifer isolate:ASB-BC8 RefSeq Genome sequencing and assembly

See Genome Information for Lates calcarifer
The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA294489). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.
AccessionPRJNA345597
Data TypeRefSeq Genome sequencing and assembly
ScopeMonoisolate
OrganismLates calcarifer[Taxonomy ID: 8187]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates; Lates calcarifer
Publications (total 5)
  • Zoccola E et al., "Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer).", Mol Immunol, 2017 Mar;83:33-45
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SubmissionRegistration date: 9-May-2016
Temasek Life Sciences Laboratory
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)56661
Transcript53641
Protein Sequences45352
Publications
PubMed5
PMC4
Other datasets
BioSample1
Assembly1
Related GenBank Project
PRJNA294489 : Lates calcarifer isolate:ASB-BC8 Genome sequencing and assembly

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