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Accession: PRJNA345553 ID: 345553

Mus musculus (house mouse)

Next-gen RNA sequencing of mouse osteosarcoma tumors

See Genome Information for Mus musculus
Trascriptome analysis of osteosarcoma samples were performed Overall design: Tumor samples were obtained from a previously published Sleeping Beauty forward genetic screen, cell lines were derived from previous primary tumors and sequenced using Illumina HiSeq 2000
AccessionPRJNA345553; GEO: GSE87685
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsScott MC et al., "Comparative Transcriptome Analysis Quantifies Immune Cell Transcript Levels, Metastatic Progression, and Survival in Osteosarcoma.", Cancer Res, 2018 Jan 15;78(2):326-337
SubmissionRegistration date: 6-Oct-2016
Masonic Cancer Center, University of Minnesota
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments103
Publications
PubMed1
PMC1
Other datasets
BioSample103
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes7
SRA Data Details
ParameterValue
Data volume, Gbases246
Data volume, Tbytes0.17

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