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Accession: PRJNA345482 ID: 345482

Canis lupus familiaris (dog)

Next-gen RNA sequencing of dog osteosarcoma tumors

See Genome Information for Canis lupus familiaris
Trascriptome analysis of osteosarcoma samples were performed Overall design: Tumor samples were obtained from Rottweilers and Golden Retrievers with proper consents, cell lines were derived from privious primary tumors and sequenced using Illumina HiSeq 2000
AccessionPRJNA345482; GEO: GSE87649
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismCanis lupus familiaris[Taxonomy ID: 9615]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris
PublicationsBorgatti A et al., "Safe and Effective Sarcoma Therapy through Bispecific Targeting of EGFR and uPAR.", Mol Cancer Ther, 2017 May;16(5):956-965
SubmissionRegistration date: 5-Oct-2016
Masonic Cancer Center, University of Minnesota
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments34
Publications
PubMed1
PMC1
Other datasets
BioSample34
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases392
Data volume, Tbytes0.27

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