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Accession: PRJNA345424 ID: 345424

Homo sapiens (human)

Next-gen RNA sequencing of human osteosarcoma tumors

See Genome Information for Homo sapiens
Trascriptome analysis of osteosarcoma samples were performed Overall design: Tumor samples were obtained from UMN BioNet or HTCC, cell lines were purchased from ATCC and sequenced using Illumina HiSeq 2000
AccessionPRJNA345424; GEO: GSE87624
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsScott MC et al., "Comparative Transcriptome Analysis Quantifies Immune Cell Transcript Levels, Metastatic Progression, and Survival in Osteosarcoma.", Cancer Res, 2018 Jan 15;78(2):326-337
SubmissionRegistration date: 5-Oct-2016
Masonic Cancer Center, University of Minnesota
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments52
Publications
PubMed1
PMC1
Other datasets
BioSample52
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases485
Data volume, Tbytes0.33

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