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Accession: PRJNA344980 ID: 344980

Mus musculus (house mouse)

Dietary interventions modulate global non-coding RNA expression: a role for microRNA-chromatin-mRNA crosstalk [Chd1KD_mRNA]

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This project is a component of the Dietary interventions modulate global non-coding RNA expression: a role for microRNA-chromatin-mRNA crosstalk
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2 additional projects are components of the Dietary interventions modulate global non-coding RNA expression: a role for microRNA-chromatin-mRNA crosstalk.
47588 additional projects are related by organism.
Using high-throughput deep sequencing we profiled coding and non-coding RNA expression in Hepa1-6 cells after knockdown of Chd1. More...
AccessionPRJNA344980; GEO: GSE87511
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsGreen CD et al., "Impact of Dietary Interventions on Noncoding RNA Networks and mRNAs Encoding Chromatin-Related Factors.", Cell Rep, 2017 Mar 21;18(12):2957-2968
SubmissionRegistration date: 30-Sep-2016
Molecular Systems Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases27
Data volume, Mbytes11835

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