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Accession: PRJNA344903 ID: 344903

Analysis of germline modifiers of aggressive prostate cancer using cross-species variation and systems genetics

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA344903; GEO: GSE87491
TypeUmbrella project
PublicationsWinter JM et al., "Mapping Complex Traits in a Diversity Outbred F1 Mouse Population Identifies Germline Modifiers of Metastasis in Human Prostate Cancer.", Cell Syst, 2017 Jan 25;4(1):31-45.e6
SubmissionRegistration date: 29-Sep-2016
NHGRI, NIH
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments281
Publications
PubMed1
PMC1
Other datasets
BioSample281
GEO DataSets4
GEO Data Details
ParameterValue
Data volume, Spots965106
Data volume, Processed Mbytes16
Data volume, Supplementary Mbytes185
SRA Data Details
ParameterValue
Data volume, Gbases3,821
Data volume, Tbytes1.78
Analysis of germline modifiers of aggressive prostate cancer using cross-species variation and systems genetics encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Transcriptome or Gene expression3
BioProject
accession
OrganismTitle
PRJNA344907Homo sapiensClonal isolates of PC3 cells overexpressing RWDD4 (NHGRI, NIH)
PRJNA344908Homo sapiensClonal isolates of PC3 cells overexpressing CENPU (NHGRI, NIH)
PRJNA350679Mus musculusCandidate Gene Identification Through RNA-Seq Analysis of (TRAMP x J:DO) F1 Primary Tumors (NHGRI, NIH)

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