See
Genome Information for Homo sapiens
We have carried out deep directional sequencing of mRNA isolated from normoxic (control) SQ20B cells (N=4) and hypoxic (16h at 0.5% oxygen) cells (N=4).
Overall design: Normoxic compared to hypoxic, with 4 biological replicates.
| Accession | PRJNA344795; GEO: GSE87456 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications | Brady LK et al., "Transcriptome analysis of hypoxic cancer cells uncovers intron retention in EIF2B5 as a mechanism to inhibit translation.", PLoS Biol, 2017 Sep;15(9):e2002623 |
| Submission | Registration date: 28-Sep-2016
Koumenis, Radiation Oncology, University of Pennsylvania |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
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| Sequence data |
| SRA Experiments | 8 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 8 |
| GEO DataSets | 1 |