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Accession: PRJNA344452 ID: 344452

Arabidopsis thaliana (thale cress)

RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]

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This project is a component of the Direct transcriptional integration of phosphate starvation and disease resistance in response to a root microbiome
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2 additional projects are components of the Direct transcriptional integration of phosphate starvation and disease resistance in response to a root microbiome.
5935 additional projects are related by organism.
This study evaluates whether different pre-treatments (+Pi, -Pi and +Phi) influences the phosphate starvation transcriptional response triggered by a bacterial synthetic community in Arabidopsis seedlings. More...
AccessionPRJNA344452; GEO: GSE87337
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsCastrillo G et al., "Root microbiota drive direct integration of phosphate stress and immunity.", Nature, 2017 Mar 23;543(7646):513-518
SubmissionRegistration date: 26-Sep-2016
Dangl lab, Biology, University of North Carolina at Chapel Hill
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Sequence data
SRA Experiments144
Publications
PubMed1
PMC1
Other datasets
BioSample144
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases36
Data volume, Mbytes12568

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