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Accession: PRJEB15060 ID: 344150

Transcriptional profiling of CD48-/CD48+ LSK cells in mice with a Sbds-deficient niche (mesenchymal cells)

Transcriptional profiling (SMARTer-Seq) has been performed on CD48-/CD48+ LSK hematopoietic cells to determine the effect introduced by the abrogation of Sbds within mesenchymal cells.

Mesenchymal niche cells may drive tissue failure and malignant transformation in the hematopoietic system but the molecular mechanisms and their relevance to human disease remain poorly defined Here, we show that perturbation of mesenchymal cells in a mouse model of the preleukemic disorder Shwachman-Diamond syndrome induces mitochondrial dysfunction, oxidative stress and activation of DNA damage responses in hematopoietic stem and progenitor cells. More...
AccessionPRJEB15060; ENA-SUBMISSION: ERA681934
ScopeMonoisolate
SubmissionRegistration date: 23-Sep-2016
Erasmus Medical Center
Locus Tag PrefixBQ1470
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments15
Other datasets
BioSample15
SRA Data Details
ParameterValue
Data volume, Mbytes71133

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