See
Genome Information for Mus musculus
Computational Approach to define binding sites on lncRNAs validated with eCLIP data
Overall design: Using Global Score performances, we investigated protein interactions with Xist lncRNA, the master regulator of X chromosome inactivation. We validated our calculations by means of enhanced individual nucleotide CLIP (eCLIP)
| Accession | PRJNA343946; GEO: GSE87233 |
| Scope | Multiisolate |
| Organism | Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus |
| Publications | Cirillo D et al., "Quantitative predictions of protein interactions with long noncoding RNAs.", Nat Methods, 2016 Dec 29;14(1):5-6 |
| Submission | Registration date: 22-Sep-2016
Guttman, Caltech |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 3 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 3 |
| GEO DataSets | 1 |