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Accession: PRJNA343801 ID: 343801

Homo sapiens (human)

Transcriptome analysis of human HT1080 cells overexpressing full length or soluble nucleoplasmic fragment of NET29/TMEM120A, NET39/PPAPDC3 and NET47/TM7SF2

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This project is a component of the Transcriptional and genome organization changes in HT1080 cells after overexpression of tissue-specific nuclear transmembrane proteins (NETs)
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1 additional project is a component of the Transcriptional and genome organization changes in HT1080 cells after overexpression of tissue-specific nuclear transmembrane proteins (NETs).
66644 additional projects are related by organism.
The nuclear transmembrane proteins (NETs) NET29/TMEM120A, NET39/PPAPDC3 and NET47/TM7SF2 are able to reposition chromosomes towards/away from the nuclear envelope when overexpressed or knocked down in HT1080 cells. More...
AccessionPRJNA343801; GEO: GSE87150
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publicationsde Las Heras JI et al., "Tissue-specific NETs alter genome organization and regulation even in a heterologous system.", Nucleus, 2017 Jan 2;8(1):81-97
SubmissionRegistration date: 20-Sep-2016
Swann 5.12, Wellcome Trust Centre, University of Edinburgh
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
PMC1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots1317654
Data volume, Processed Mbytes32
Data volume, Supplementary Mbytes6

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