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Genome Information for Homo sapiens
We used chromatin immunoprecipitation-coupled to deep sequencing (ChIP-seq) to profile genome-wide locations of H3K4 trimethylation (H3K4me3) and H3K27 trimethylation (H3K27me3) epigenetic marks in SATB1-depleted MDA-MB-231 aggressive breast cells.
Overall design: Examination of 2 different histone modifications in a breast cancer cell line
| Accession | PRJNA343775; GEO: GSE87169 |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications | Lee JJ et al., "Epigenetic regulation of long noncoding RNA UCA1 by SATB1 in breast cancer.", BMB Rep, 2016 Oct;49(10):578-583 |
| Submission | Registration date: 21-Sep-2016
Yonsei University |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 6 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 6 |
| GEO DataSets | 1 |