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Accession: PRJNA343730 ID: 343730

Populus tremula x Populus alba

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and CsDML OX Transcriptomes

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350 additional projects are related by organism.
Purpose: we performed comparative RNA-seq analyses to identify differentially expressed genes between CsDML OX transgenic lines Wild Type Methods: Expression profiles were examined by RNA sequencing (RNA-Seq) in SD-induced (for 28 days) shoot apices of CsDML over-expressor and wild-type hybrid poplars. More...
AccessionPRJNA343730; GEO: GSE87155
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismPopulus tremula x Populus alba[Taxonomy ID: 80863]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus; Populus tremula x Populus alba
PublicationsConde D et al., "Overexpression of DEMETER, a DNA demethylase, promotes early apical bud maturation in poplar.", Plant Cell Environ, 2017 Nov;40(11):2806-2819
SubmissionRegistration date: 21-Sep-2016
171, Centre for Plant Biotechnology and Genomics U.P.M. – I.N.I.A
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
Other datasets
BioSample3
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases9
Data volume, Mbytes3803

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