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Accession: PRJNA342807 ID: 342807

Streptococcus pneumoniae

Streptococcus pneumoniae Genome sequencing and assembly

See Genome Information for Streptococcus pneumoniae
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648 additional projects are related by organism.
Genome sequencing of serotype 3 Streptococcus pneumoniae from New York City
AccessionPRJNA342807
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismStreptococcus pneumoniae[Taxonomy ID: 1313]
Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae
SubmissionRegistration date: 19-Dec-2016
JCVI
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3338
WGS master35
SRA Experiments35
Protein Sequences70615
Other datasets
BioSample35
Assembly35
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
35
35
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001910385.1ContigMQRR00000000SAMN05774310
MMC_A08
Streptococcus pneumoniae
GCA_001910225.1ContigMQSN00000000SAMN05774332
MMC_D06
Streptococcus pneumoniae
GCA_001910205.1ContigMQSG00000000SAMN05774324
MMC_C06
Streptococcus pneumoniae
GCA_001910185.1ContigMQRW00000000SAMN05774316
MMC_B06
Streptococcus pneumoniae
GCA_001910155.1ContigMQRV00000000SAMN05774315
MMC_B05
Streptococcus pneumoniae
GCA_001910135.1ContigMQRZ00000000SAMN05774319
MMC_C01
Streptococcus pneumoniae
GCA_001909925.1ContigMQRT00000000SAMN05774312
MMC_B02
Streptococcus pneumoniae
GCA_001909905.1ContigMQRP00000000SAMN05774308
MMC_A06
Streptococcus pneumoniae
GCA_001909885.1ContigMQRQ00000000SAMN05774309
MMC_A07
Streptococcus pneumoniae
GCA_001909855.1ContigMQSK00000000SAMN05774328
MMC_D02
Streptococcus pneumoniae
GCA_001909835.1ContigMQRS00000000SAMN05774311
MMC_B01
Streptococcus pneumoniae
GCA_001910025.1ContigMQRY00000000SAMN05774318
MMC_B08
Streptococcus pneumoniae
GCA_001909995.1ContigMQSI00000000SAMN05774326
MMC_C08
Streptococcus pneumoniae
GCA_001909955.1ContigMQSL00000000SAMN05774329
MMC_D03
Streptococcus pneumoniae
GCA_001909965.1ContigMQSM00000000SAMN05774331
MMC_D05
Streptococcus pneumoniae
GCA_001910075.1ContigMQSP00000000SAMN05774334
MMC_D08
Streptococcus pneumoniae
GCA_001910295.1ContigMQRU00000000SAMN05774314
MMC_B04
Streptococcus pneumoniae
GCA_001909765.1ContigMQSE00000000SAMN05774322
MMC_C04
Streptococcus pneumoniae
GCA_001909715.1ContigMQRX00000000SAMN05774317
MMC_B07
Streptococcus pneumoniae
GCA_001909725.1ContigMQSO00000000SAMN05774333
MMC_D07
Streptococcus pneumoniae
GCA_001909705.1ContigMQSQ00000000SAMN05774335
MMC_E01
Streptococcus pneumoniae
GCA_001909225.1ContigMRVQ00000000SAMN05774313
MMC_B03
Streptococcus pneumoniae
GCA_001909235.1ContigMRVN00000000SAMN05774330
MMC_D04
Streptococcus pneumoniae
GCA_001909205.1ContigMRVO00000000SAMN05774336
MMC_E02
Streptococcus pneumoniae
GCA_001909215.1ContigMRVP00000000SAMN05774337
MMC_E03
Streptococcus pneumoniae
GCA_001909415.1ContigMQSD00000000SAMN05774321
MMC_C03
Streptococcus pneumoniae
GCA_001909405.1ContigMQSB00000000SAMN05774304
MMC_A02
Streptococcus pneumoniae
GCA_001909365.1ContigMQSA00000000SAMN05774303
MMC_A01
Streptococcus pneumoniae
GCA_001909355.1ContigMQSJ00000000SAMN05774327
MMC_D01
Streptococcus pneumoniae
GCA_001909345.1ContigMQSC00000000SAMN05774320
MMC_C02
Streptococcus pneumoniae
GCA_001909565.1ContigMQRM00000000SAMN05774305
MMC_A03
Streptococcus pneumoniae
GCA_001909515.1ContigMQSF00000000SAMN05774323
MMC_C05
Streptococcus pneumoniae
GCA_001909525.1ContigMQSH00000000SAMN05774325
MMC_C07
Streptococcus pneumoniae
GCA_001910445.1ContigMQRO00000000SAMN05774307
MMC_A05
Streptococcus pneumoniae
GCA_001935995.1ContigMQRN00000000SAMN05774306
MMC_A04
Streptococcus pneumoniae
SRA Data Details
ParameterValue
Data volume, Gbases28
Data volume, Mbytes13030

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