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Accession: PRJNA342416 ID: 342416

Mus musculus (house mouse)

Transcriptome of diurnal wild-type neutrophils and neutrophils deficient in cxcr2, cxcr4 and arntl

See Genome Information for Mus musculus
Our study aims to analyze time-dependent changes in neutrophil phenotype, compare them with included neutrophil-specific mutants, and indentify common signatures among the 5 groups Overall design: Blood neutrophils from wild-type and mutants were isolated based on Ly6G staining, then standard RNA extraction procedures were performed. Wild-type samples were extracted at ZT5 and ZT13, all other samples at ZT5.
AccessionPRJNA342416; GEO: GSE86619
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsAdrover JM et al., "A Neutrophil Timer Coordinates Immune Defense and Vascular Protection.", Immunity, 2019 Feb 19;50(2):390-402.e10
SubmissionRegistration date: 9-Sep-2016
Bioinformatics Unit, CNIC
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments14
Publications
PubMed1
Other datasets
BioSample14
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases12
Data volume, Mbytes7743

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