Antarctica fungi (ID 342238) - BioProject

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Accession: PRJNA342238 ID: 342238

Antarctica fungi

Genome sequencing and assembly of Antarctic fungi

Sequencing of soil and endolithic species of fungi from Antarctica

Accession	PRJNA342238
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications (total 4) Less...	Coleine C et al., "Peculiar genomic traits in the stress-adapted cryptoendolithic Antarctic fungus Friedmanniomyces endolithicus.", Fungal Biol, 2020 May;124(5):458-467 More... Coleine C et al., "Peculiar genomic traits in the stress-adapted cryptoendolithic Antarctic fungus Friedmanniomyces endolithicus.", Fungal Biol, 2020 May;124(5):458-467 Coleine C et al., "Draft Genome Sequence of the Yeast Rhodotorula sp. Strain CCFEE 5036, Isolated from McMurdo Dry Valleys, Antarctica.", Microbiol Resour Announc, 2020 Apr 2;9(14) Coleine C et al., "Draft Genome Sequence of an Antarctic Isolate of the Black Yeast Fungus Exophiala mesophila.", Microbiol Resour Announc, 2019 May 9;8(19) Coleine C et al., "Draft Genome Sequences of the Antarctic Endolithic Fungi Rachicladosporium antarcticum CCFEE 5527 and Rachicladosporium sp. CCFEE 5018.", Genome Announc, 2017 Jul 6;5(27) Less...
Submission	Registration date: 8-Sep-2016 University of California, Riverside
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	8605
WGS master	8
SRA Experiments	11
Protein Sequences	108993
Publications
PubMed	4
PMC	3
Other datasets
BioSample	8
Assembly	8

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

8
8

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_005059845.1	NAJN00000000	SAMN06285183	CCFEE 5187	Cryomyces minteri
GCA_004011775.1	NAJM00000000	SAMN06285186	CCFEE 6314	Exophiala mesophila
GCA_005059855.1	NAJP00000000	SAMN06285188	CCFEE 5311	Friedmanniomyces endolithicus
GCA_005059865.1	NAJQ00000000	SAMN06285189	CCFEE 5184	Friedmanniomyces simplex
GCA_002077065.1	NAJO00000000	SAMN06285182	CCFEE 5527	Rachicladosporium antarcticum
GCA_002077045.2	NAEU00000000	SAMN06285185	CCFEE 5018	Rachicladosporium sp. CCFEE 5018
GCA_005059875.1	MXAQ00000000	SAMN06285187	CCFEE 5036	Rhodotorula sp. CCFEE 5036
GCA_005059885.1	NAJL00000000	SAMN06285184	CCFEE 6315	Salinomyces thailandica

SRA Data Details

Parameter	Value
Data volume, Gbases	44
Data volume, Mbytes	26876

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GOLD Multi-Isolate BioProject - 342238 [Genomes On Line Database]
GOLD Multi-Isolate BioProject - 342238
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Genome sequencing and assembly of Antarctic fungi

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