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Accession: PRJNA342187 ID: 342187

Mus musculus (house mouse)

Identification of hypoxia-induced HIF1A targets in melanocytes reveals a molecular profile associated with poor prognosis for melanoma [ChIP-seq]

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This project is a component of the Identification of hypoxia-induced HIF1A targets in melanocytes reveals a molecular profile associated with poor prognosis for melanoma
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1 additional project is a component of the Identification of hypoxia-induced HIF1A targets in melanocytes reveals a molecular profile associated with poor prognosis for melanoma.
47588 additional projects are related by organism.
ChIP-seq profiling of HIF1A binding in mouse immortalized melanocyte cell line melan-Ink4a-Arf null cells Overall design: ChIP-seq profiling of HIF1A binding in mouse immortalized melanocyte cell line melan-Ink4a-Arf null cells contributor: NISC Comparative Sequencing Program
AccessionPRJNA342187; GEO: GSE86554
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsLoftus SK et al., "Hypoxia-induced HIF1α targets in melanocytes reveal a molecular profile associated with poor melanoma prognosis.", Pigment Cell Melanoma Res, 2017 May;30(3):339-352
SubmissionRegistration date: 7-Sep-2016
National Human Genome Research Institute
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
PMC1
Other datasets
BioSample3
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1448
SRA Data Details
ParameterValue
Data volume, Gbases16
Data volume, Mbytes11604

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