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Accession: PRJNA341857 ID: 341857

Caenorhabditis elegans

Whole-genome microarray of Caenorhabditis elegans strains DA650 and RC301 exposed to Pseudomonas aeruginosa PA14

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1494 additional projects are related by organism.
To gain insights into the mechanisms by which RC301 compensates for the deficiency in the NPR-1 controlled immune and behavioral responses of strain DA650, we determine the whole-genome expression profile of these two strains upon exposure to Pseudomonas aeruginosa strain PA14 Overall design: DA650 and RC301 animals were synchronized to developmental stage L1. More...
AccessionPRJNA341857; GEO: GSE86431
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismCaenorhabditis elegans[Taxonomy ID: 6239]
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans
PublicationsMartin N et al., "Natural Genetic Variation in the Caenorhabditis elegans Response to Pseudomonas aeruginosa.", G3 (Bethesda), 2017 Apr 3;7(4):1137-1147
Grants
  • "C. elegans to study organismal control of recovery from bacterial infections" (Grant ID R01 AI117911, National Institute of Allergy and Infectious Diseases)
  • "Genetic analysis of innate immunity using C. elegans" (Grant ID R01 GM070977, NIH National Institute of General Medical Sciences)
SubmissionRegistration date: 5-Sep-2016
Aballay Laboratory, Molecular Genetics and Microbiology, Duke University Medical Center
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
PMC1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots271320
Data volume, Processed Mbytes4
Data volume, Supplementary Mbytes54

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