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Accession: PRJNA341854 ID: 341854

Homo sapiens (human)

Directional RNA-Seq on CD4+ T cells collected from children with asthma with/without obesity

See Genome Information for Homo sapiens
We compare the CD4+ T cell transcriptome between obese and normal-weight children with asthma to identify molecules/pathways differentially expressed in obese asthmatic CD4+ T cells Overall design: CD4+ T cell transcriptome generated using Directional RNA-Seq library preparatio; A=Normal-weight, B=obese
AccessionPRJNA341854; GEO: GSE86430
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsRastogi D et al., "CDC42-related genes are upregulated in helper T cells from obese asthmatic children.", J Allergy Clin Immunol, 2018 Feb;141(2):539-548.e7
SubmissionRegistration date: 5-Sep-2016
Pediatrics, Albert Einstein College of Medicine
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments42
Publications
PubMed1
PMC1
Other datasets
BioSample42
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5
SRA Data Details
ParameterValue
Data volume, Gbases68
Data volume, Mbytes44090

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