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Accession: PRJNA341705 ID: 341705

Gallus gallus (chicken)

Next Generation Sequencing Facilitates identification of crucial genes for feather vane shape variations

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This project is a component of the Histone H3 Lysine 4 trimethylation (H3K4me3) ChIP-Seq and RNA-seq of narrower and wider vanes of primary remiges
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1 additional project is a component of the Histone H3 Lysine 4 trimethylation (H3K4me3) ChIP-Seq and RNA-seq of narrower and wider vanes of primary remiges.
1240 additional projects are related by organism.
Purpose: The goals of this study is to identify crucial genes associated with narrow and wide vane sizes in feather epithelium and mesenchyme (pulp) Overall design: proximal follicles of 3 primary remiges from Spafas white leghorn chickens into the lateral and medial halves and separated the epithelium from the mesenchyme in 2xCMF solution. More...
AccessionPRJNA341705; GEO: GSE86413
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismGallus gallus[Taxonomy ID: 9031]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus
PublicationsLi A et al., "Diverse feather shape evolution enabled by coupling anisotropic signalling modules with self-organizing branching programme.", Nat Commun, 2017 Jan 20;8:ncomms14139
SubmissionRegistration date: 2-Sep-2016
Pathology, University of Southern California
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments16
Publications
PubMed1
PMC1
Other datasets
BioSample16
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes6
SRA Data Details
ParameterValue
Data volume, Gbases23
Data volume, Mbytes16496

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