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Accession: PRJNA341464 ID: 341464

Homo sapiens (human)

SETBP1-WT and SETBP1-G870S DNA binding propensity [ChIP-Seq TF]

See Genome Information for Homo sapiens
ChIP-seq against V5 has been performed in order to investigate the role of SETBP1 as a DNA binding protein Overall design: n=3: 3 ChIP-seq against V5 have been performed in HEK 293FLP cells expressing SETBP1-WT, SETBP1-G870S or Empty vector
AccessionPRJNA341464; GEO: GSE86334
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsPiazza R et al., "SETBP1 induces transcription of a network of development genes by acting as an epigenetic hub.", Nat Commun, 2018 Jun 6;9(1):2192
SubmissionRegistration date: 1-Sep-2016
Stem Cells and Neurogenesis, Neuroscience, Ospedale San Raffaele
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3
Publications
PubMed1
PMC1
Other datasets
BioSample3
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes376
SRA Data Details
ParameterValue
Data volume, Gbases3
Data volume, Mbytes979

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