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Accession: PRJNA340947 ID: 340947

Oryza sativa Japonica Group (Japanese rice)

Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels

See Genome Information for Oryza sativa
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We performed poly(A)+, poly(A)-, nuclear, small RNA-seq analysis on Oryza sativa japonica WT plants. More...
AccessionPRJNA340947; GEO: GSE86215
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismOryza sativa Japonica Group[Taxonomy ID: 39947]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa Japonica Group
PublicationsYuan J et al., "Stress-responsive regulation of long non-coding RNA polyadenylation in Oryza sativa.", Plant J, 2018 Mar;93(5):814-827
SubmissionRegistration date: 30-Aug-2016
Tsinghua University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments38
Publications
PubMed1
Other datasets
BioSample38
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases341
Data volume, Tbytes0.22

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