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Accession: PRJNA340368 ID: 340368

Mus musculus (house mouse)

Mapping of Long-Range Chromatin Interactions using Proximity Ligation Assisted ChIP-seq

See Genome Information for Mus musculus
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47588 additional projects are related by organism.
We report Proximity Ligation Assisted ChIP-sequencing (PLAC-seq), a method for comprehensive detection of long-range interactions associated with proteins of interest. More...
AccessionPRJNA340368; GEO: GSE86150
Data TypeEpigenomics
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsFang R et al., "Mapping of long-range chromatin interactions by proximity ligation-assisted ChIP-seq.", Cell Res, 2016 Dec;26(12):1345-1348
Grants
  • "San Diego Center for 4D Nucleome Research" (Grant ID U54 DK107977, National Institute of Diabetes and Digestive and Kidney Diseases)
  • "Center for Mammalian Regulatory Genomics" (Grant ID U54 HG006997, National Human Genome Research Institute)
SubmissionRegistration date: 28-Aug-2016
Ren Lab, Ludwig Institute for Cancer Research
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed1
PMC1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes13349
SRA Data Details
ParameterValue
Data volume, Gbases497
Data volume, Tbytes0.27

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