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Accession: PRJNA340279 ID: 340279

Mus musculus (house mouse)

Time course profiling of IEC and total colonic tissue transcriptome in T.mu colonized animals

See Genome Information for Mus musculus
In this experiment we profiled the transcriptome of intestinal colonic epithelium and total colonic tissue of animals colonized with T. More...
AccessionPRJNA340279; GEO: GSE86111
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
PublicationsChudnovskiy A et al., "Host-Protozoan Interactions Protect from Mucosal Infections through Activation of the Inflammasome.", Cell, 2016 Oct 6;167(2):444-456.e14
SubmissionRegistration date: 26-Aug-2016
Miriam Merad Lab, Oncological Sciences, Mount Sinai Hospital, New York
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments40
Publications
PubMed1
PMC1
Other datasets
BioSample40
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases2
Data volume, Mbytes797

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