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Accession: PRJNA340086 ID: 340086

Lactobacillus

Lactobacillus Genome sequencing and assembly

Comparative genomics of Lactobacilli isolated from food sources such as pickled vegetables and cured beef.
AccessionPRJNA340086
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismLactobacillus[Taxonomy ID: 1578]
Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
SubmissionRegistration date: 26-Sep-2017
Karolinska Institutet
RelevanceFood microbiology
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)246
WGS master20
Protein Sequences12123
Other datasets
BioSample20
Assembly20
Assembly details:
Assembly levelNumber of Assemblies
18
2
20
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003609655.1ScaffoldMECY00000000SAMN05645833
Lp109
GCA_002370985.1ScaffoldNQNQ00000000SAMN05645839
Lp510
GCA_002370965.1ContigNQNE00000000SAMN05645851
ATCC 8014
GCA_002370925.1ContigNQNI00000000SAMN05645847
Lp820
GCA_009889775.1ScaffoldNQND00000000SAMN05645852
LpRas
GCA_009889735.1ScaffoldNQNF00000000SAMN05645850
Lp835
GCA_009890095.1ScaffoldNQNV00000000SAMN05645834
Lp201
GCA_009890055.1ScaffoldNQNS00000000SAMN05645837
Lp305
GCA_009890045.1ScaffoldNQNU00000000SAMN05645835
Lp206
GCA_009890025.1ScaffoldNQNT00000000SAMN05645836
Lp218
GCA_009889995.1ScaffoldNQNP00000000SAMN05645840
Lp519
GCA_009889975.1ScaffoldNQNR00000000SAMN05645838
Lp309
GCA_009889965.1ScaffoldNQNO00000000SAMN05645841
Lp520
GCA_009889935.1ScaffoldNQNM00000000SAMN05645843
Lp541
GCA_009889895.1ScaffoldNQNL00000000SAMN05645844
Lp542
GCA_009889925.1ScaffoldNQNN00000000SAMN05645842
Lp533
GCA_009889885.1ScaffoldNQNK00000000SAMN05645845
Lp543
GCA_009889865.1ScaffoldNQNH00000000SAMN05645848
Lp821
GCA_009889835.1ScaffoldNQNJ00000000SAMN05645846
Lp546
GCA_009889825.1ScaffoldNQNG00000000SAMN05645849
Lp823

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