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Accession: PRJNA339913 ID: 339913

Lactobacillus species

Genome Sequencing and Assembly of Lactobacillus sanfranciscensis and Lactobacillus lindneri Genome sequencing and assembly

Genome Sequencing and Assembly of Lactobacillus sanfranciscensis and Lactobacillus lindneri - Comparative genomics to identify niche specific genes
AccessionPRJNA339913
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 24-Aug-2016
Technische Universitaet Muenchen
RelevanceIndustrial
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)650
WGS master19
Protein Sequences23966
Other datasets
BioSample21
Assembly19
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
19
19
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_002907115.1ContigMIXU00000000SAMN05615205
TMW 1.2007
Fructilactobacillus lindneri
GCA_002907105.1ContigMIXS00000000SAMN05615204
TMW 1.2006
Fructilactobacillus lindneri
GCA_002907075.1ContigMIXW00000000SAMN05615207
TMW 1.2082
Fructilactobacillus lindneri
GCA_002907065.1ContigMIXR00000000SAMN05615203
TMW 1.1433
Fructilactobacillus lindneri
GCA_002907045.1ContigMIXV00000000SAMN05615206
TMW 1.2008
Fructilactobacillus lindneri
GCA_002907025.1ContigMIXQ00000000SAMN05615202
TMW 1.1285
Fructilactobacillus lindneri
GCA_002907375.1ContigMIYK00000000SAMN05762717
TMW 1.88
Fructilactobacillus lindneri DSM 20690 = JCM 11027
GCA_002907345.1ContigMIYH00000000SAMN05615218
TMW 1.392
Fructilactobacillus sanfranciscensis
GCA_002907325.1ContigMIYG00000000SAMN05615217
TMW 1.1150
Fructilactobacillus sanfranciscensis
GCA_002907305.1ContigMIYE00000000SAMN05615215
TMW 1.54
Fructilactobacillus sanfranciscensis
GCA_002907285.1ContigMIYF00000000SAMN05615216
TMW 1.1597
Fructilactobacillus sanfranciscensis
GCA_002907255.1ContigMIYD00000000SAMN05615214
TMW 1.726
Fructilactobacillus sanfranciscensis
GCA_002907245.1ContigMIYB00000000SAMN05615212
TMW 1.2141
Fructilactobacillus sanfranciscensis
GCA_002907225.1ContigMIYC00000000SAMN05615213
TMW 1.2142
Fructilactobacillus sanfranciscensis
GCA_002907205.1ContigMIYA00000000SAMN05615211
TMW 1.2140
Fructilactobacillus sanfranciscensis
GCA_002907185.1ContigMIXZ00000000SAMN05615210
TMW 1.2139
Fructilactobacillus sanfranciscensis
GCA_002907155.1ContigMIXY00000000SAMN05615209
TMW 1.2138
Fructilactobacillus sanfranciscensis
GCA_002907145.1ContigMIXX00000000SAMN05615208
TMW 1.2137
Fructilactobacillus sanfranciscensis
GCA_002907365.1ContigMIYJ00000000SAMN05762716
TMW 1.53
Fructilactobacillus sanfranciscensis DSM 20451

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