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Accession: PRJNA339550 ID: 339550

Homo sapiens (human)

Transcriptome analysis of alternative splicing events in WT and P-KO H9 cells

See Genome Information for Homo sapiens
We have used RNA-seq to explore alternative splicing events in WT and P-KO H9 cells Overall design: RNA-seq for wild type (WT) and SPA paternal KO (P-KO) H9 cells
AccessionPRJNA339550; GEO: GSE85854
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsWu H et al., "Unusual Processing Generates SPA LncRNAs that Sequester Multiple RNA Binding Proteins.", Mol Cell, 2016 Nov 3;64(3):534-548
SubmissionRegistration date: 19-Aug-2016
CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes685
SRA Data Details
ParameterValue
Data volume, Gbases30
Data volume, Mbytes14525

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