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Accession: PRJNA339456 ID: 339456

Vitis vinifera (wine grape)

Field systems biology of grapevine red blotch reveals the impact of viral infections on the transcriptional and hormonal regulation of berry ripening

See Genome Information for Vitis vinifera
Red blotch disease causes major reprogramming of grape berry metabolism and development leading to the inhibition of ripening pathways and stress responses Overall design: Red-skinned grape berries naturally infected with the Grapevine Red Blotch associated Virus and healthy controls at four stages of ripening (pre-veraison, veraison, post-veraison and harvest) and collected from two independent vineyards (Healdsburg and Oakville)
AccessionPRJNA339456; GEO: GSE85812
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismVitis vinifera[Taxonomy ID: 29760]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera
PublicationsBlanco-Ulate B et al., "Red blotch disease alters grape berry development and metabolism by interfering with the transcriptional and hormonal regulation of ripening.", J Exp Bot, 2017 Feb 1;68(5):1225-1238
SubmissionRegistration date: 18-Aug-2016
Blanco Lab, Plant Sciences, University of California, Davis
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments52
Publications
PubMed1
PMC1
Other datasets
BioSample52
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases37
Data volume, Mbytes12707

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