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Accession: PRJNA339147 ID: 339147

Cricetulus griseus (Chinese hamster)

Next Generation Sequencing Facilitates Quantitative Analysis of miR-29b-1 and miR-29a targets in CHO-K1 cells

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The goal of this experiment was to identify the putative mRNA targets of miR-29b-1 and miR-29a in CHO-K1 cells Overall design: Methods: CHO-K1 cells were transfected, in three separate experiments, with pre-miR-29b-1, pre-miR-29a, or anti-miR-29a (which blocks both miR-29b-1 and miR-29a). More...
AccessionPRJNA339147; GEO: GSE85710
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismCricetulus griseus[Taxonomy ID: 10029]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus
PublicationsMuluhngwi P et al., "Regulation of miR-29b-1/a transcription and identification of target mRNAs in CHO-K1 cells.", Mol Cell Endocrinol, 2017 Mar 15;444:38-47
Grants
  • "KY IDeA Networks of Biomedical Research Excellence: Administrative Core" (Grant ID P20 GM103436, NIH National Institute of General Medical Sciences)
SubmissionRegistration date: 16-Aug-2016
Bioinformatics and Biomedical Computing Laboratory, Computer Engineering and Computer Science, University of Louisville
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments9
Publications
PubMed1
PMC1
Other datasets
BioSample9
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes3
SRA Data Details
ParameterValue
Data volume, Gbases29
Data volume, Mbytes10497

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