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Accession: PRJNA339006 ID: 339006

Homo sapiens (human)

RNAseq analysis of lncRNA silenced primary melanoma cell line WM902B

See Genome Information for Homo sapiens
Purpose: Study the changes in gene expression upon silencing of lncRNA TINCR Methods: Primary melanoma cell line WM902B was transduced with lientiviruses expressing Scrambled and TINCR directed shRNA hairpins Results: we found that TINCR silencing induces switch to invasive phenotype in WM902B primary melanoma cells Overall design: Analysis of differential gene expression in shscrambled and shTINCR expressing WM902B cells
AccessionPRJNA339006; GEO: GSE85656
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsMelixetian M et al., "Long non-coding RNA TINCR suppresses metastatic melanoma dissemination by preventing ATF4 translation.", EMBO Rep, 2021 Mar 3;22(3):e50852
SubmissionRegistration date: 15-Aug-2016
European Institute of Oncology
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments22
Publications
PubMed1
PMC1
Other datasets
BioSample22
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases160
Data volume, Tbytes0.11

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