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Accession: PRJNA338951 ID: 338951

Homo sapiens (human)

Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype [WGBS]

See Genome Information for Homo sapiens
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This project is a component of the Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype
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4 additional projects are components of the Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype.
66644 additional projects are related by organism.
Cancer Associated Fibroblasts (CAFs) play an active role in tumourigenesis. It is unknown how the permanent phenotypic changes in CAFs are encoded at the molecular level. More...
AccessionPRJNA338951; GEO: GSE85609
Data TypeEpigenomics
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
Publications
  • Lam D et al., "Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels.", Clin Epigenetics, 2020 Jun 22;12(1):90
  • Pidsley R et al., "Enduring epigenetic landmarks define the cancer microenvironment.", Genome Res, 2018 May;28(5):625-638
SubmissionRegistration date: 15-Aug-2016
Garvan Institute of Medical Research
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed2
PMC2
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes377
SRA Data Details
ParameterValue
Data volume, Gbases244
Data volume, Tbytes0.11

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