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Genome Information for Arabidopsis thaliana
Comparison of gene expression pattern of Al response genes between the two Arabidopsis genotypes, wild type (Columbia-0) and the AvSAMS1-expressing transformant
Overall design: Two-condition experiment, Al treated plants vs. untreated plants. Biological replicates: 2 replicates in wild types, 2 transgenic lines.
| Accession | PRJNA338912; GEO: GSE85593 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Arabidopsis thaliana[Taxonomy ID: 3702] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana |
| Publications | Ezaki B et al., "An S-adenosyl Methionine Synthetase (SAMS) Gene from Andropogon virginicus L. Confers Aluminum Stress Tolerance and Facilitates Epigenetic Gene Regulation in Arabidopsis thaliana.", Front Plant Sci, 2016;7:1627 |
| Submission | Registration date: 15-Aug-2016
Kanazawa University |
| NCBI Links | |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
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| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| GEO DataSets | 1 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 174652 |
| Data volume, Processed Mbytes | 4 |
| Data volume, Supplementary Mbytes | 18 |