This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA338783; GEO: GSE85559 |
| Type | Umbrella project |
| Publications | Shukla S et al., "Aberrant Activation of a Gastrointestinal Transcriptional Circuit in Prostate Cancer Mediates Castration Resistance.", Cancer Cell, 2017 Dec 11;32(6):792-806.e7 |
| Submission | Registration date: 12-Aug-2016
MSKCC |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 38 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 38 |
| GEO DataSets | 5 |
Expression profiling and occupancy after knockdown or over-expression of HFN1A or HNF4G in prostate cancer cells encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA338787 | Homo sapiens | HNF4G, AR, FOXA1, H3K4me1, H3K27acetyl binding sites upon knockdown and overexpression of HNF4G in 22Rv1 and LNCaP prostate cancer cells respectively (MSKCC) |
|
| Transcriptome or Gene expression | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA338785 | Homo sapiens | Expression profile of HNF1A knockdown and overexpression in 22RV1 and LNCaP cells respectively (MSKCC) | | PRJNA338786 | Homo sapiens | Expression profile of LNCaP/AR cells with or without HNF4G expression grown for long term in charcoal stripped-serum (CSS) media (MSKCC) | | PRJNA342094 | Homo sapiens | Expression profile of 22Rv1 cells upon DHT treatment (MSKCC) |
|