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Accession: PRJNA338597 ID: 338597

Escherichia coli str. K-12 substr. MG1655

E. coli K-12 MG1655 Transcriptome Quantification

See Genome Information for Escherichia coli
To parameterize our computational model of E. coli, we measured gene expression in key conditions. More...
AccessionPRJNA338597; GEO: GSE85472
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismEscherichia coli str. K-12 substr. MG1655[Taxonomy ID: 511145]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli str. K-12 substr. MG1655
PublicationsMacklin DN et al., "Simultaneous cross-evaluation of heterogeneous E. coli datasets via mechanistic simulation.", Science, 2020 Jul 24;369(6502)
SubmissionRegistration date: 11-Aug-2016
Covert Lab, Bioengineering, Stanford University
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases25
Data volume, Mbytes11283

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