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Accession: PRJNA338184 ID: 338184

human gut metagenome

Human gut microbiome with bacterial pathogen challenge

This project takes advantage of challenge studies with an important human pathogen, enterotoxigenic Escherichia coli, the etiological agent of severe diarrhea in the developed countries and traveler’s diarrhea in individuals from developed countries. More...
AccessionPRJNA338184
Data TypeRaw sequence reads, Metagenome, Transcriptome or Gene expression
ScopeEnvironment
Organismhuman gut metagenome[Taxonomy ID: 408170]
unclassified sequences; metagenomes; organismal metagenomes; human gut metagenome
Grants
  • "Host, Pathogen, and the Microbiome: Determinants of Infectious Disease Outcome: Host, Pathogen, and the Microbiome: Determinants of Infectious Disease Outcome: Host, Pathogen, and the Microbiome: Determinants of Infectious Disease Outcome" (Grant ID U19 AI110820, National Institute of Allergy and Infectious Diseases Extramural Activities)
SubmissionRegistration date: 8-Aug-2016
Institute for Genome Sciences, University of Maryland, Baltimore
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments1017
Other datasets
BioSample112
SRA Data Details
ParameterValue
Data volume, Gbases3,547
Data volume, Tbytes1.83

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