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Accession: PRJNA338166 ID: 338166

Xenopus tropicalis (tropical clawed frog)

Foxh1 marks the embryonic genome prior to the activation of the mesendoderm gene regulatory program

See Genome Information for Xenopus tropicalis
We examined the binding dynamics of the maternal TF Foxh1 over a time course of germ layer development. More...
AccessionPRJNA338166; GEO: GSE85273
Data TypeEpigenomics
ScopeMultiisolate
OrganismXenopus tropicalis[Taxonomy ID: 8364]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis
PublicationsCharney RM et al., "Foxh1 Occupies cis-Regulatory Modules Prior to Dynamic Transcription Factor Interactions Controlling the Mesendoderm Gene Program.", Dev Cell, 2017 Mar 27;40(6):595-607.e4
SubmissionRegistration date: 6-Aug-2016
Ken Cho, Developmental and Cell Biology, University of California, Irvine
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments11
Publications
PubMed1
PMC1
Other datasets
BioSample11
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes585
SRA Data Details
ParameterValue
Data volume, Gbases28
Data volume, Mbytes17893

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