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Accession: PRJNA336546 ID: 336546

Homo sapiens (human)

TT-seq captures simultaneous activation of eRNAs and promoters during T cell activation

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Jurkat T cells were activated with PMA and ionomycin. Total and Labeled fragmented RNA was extracted every 5 minutes during a time course up to 15min after activation. More...
AccessionPRJNA336546; GEO: GSE85201
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismHomo sapiens[Taxonomy ID: 9606]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens
PublicationsMichel M et al., "TT-seq captures enhancer landscapes immediately after T-cell stimulation.", Mol Syst Biol, 2017 Mar 7;13(3):920
SubmissionRegistration date: 4-Aug-2016
Max-Planck Institute for biophysical Chemistry
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes17726
SRA Data Details
ParameterValue
Data volume, Gbases176
Data volume, Mbytes84331

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